ADASTRA v1.6.10
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rs354478
chr3:13319787
C
>
T
Sequence
aaggaccgggcccacggcgatcca[C/T]cacaaaagccactgtcactgggat
ASB in cell types
HEK293 (embryonic kidney)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HEK293 (embryonic kidney)
-0.07
1.16
1.00
0.02
1.83
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
eye color
,
hdl cholesterol
,
microalbuminuria
GTEx eQTL
Brain_Cerebellar_Hemisphere
,
Brain_Cerebellum
,
Esophagus_Mucosa
,
Muscle_Skeletal
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Spleen
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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