ADASTRA v1.6.10
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rs354934
chr4:141154384
C
>
T
Sequence
atgaaagaggtcattctgtccttc[C/T]ttagcgtgcctgtgtggcacaatg
ASB in cell types
VCaP (prostate carcinoma)
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View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
VCaP (prostate carcinoma)
-0.20
1.25
1.00
1.2·10
-4
2.14
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
hdl cholesterol
GTEx eQTL
Adrenal_Gland
,
Artery_Aorta
,
Artery_Tibial
,
Colon_Sigmoid
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Muscularis
,
Heart_Atrial_Appendage
,
Heart_Left_Ventricle
,
Lung
,
Muscle_Skeletal
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale