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rs354995 chr17:6555107 T>C

Sequence
gggaggcaagaagcctttttcagc[T/C]tccttggtgtcatctcacagtgcc
ASB in cell types
HEK293 (embryonic kidney) HEK293T (embryonic kidney)
ASB for transcription factors
PRDM9_HUMAN ZN341_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PRDM9_HUMAN -1.37 1.56 1.000.03 1.50 n/a n/a
ZN341_HUMAN -1.83 1.90 1.000.04 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP infant head circumference obesity with early age of onset (age >2) parkinsons disease systolic blood pressure (sbp)
GTEx eQTL Brain_Cerebellum Colon_Sigmoid Esophagus_Mucosa Testis Thyroid Uterus Whole_Blood

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