rs35588 chr16:16046021 A>G
- Sequence
gggctgtctatcggaaggtagggg[A/G]cgctgtgccattggcatgtggccc
- ASB in cell types
- spleen 786-O (renal carcinoma) pancreas monocyte-derived macrophages
- ASB for transcription factors
- CTCF_HUMAN TF65_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.85 | 2.96 | 1.60 | 2.66 | Concordant | |||
| TF65_HUMAN | n/a | 2.58 | 1.92 | n/a | No Hit |
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Motif analysis
