rs35598069 chr1:228646801 C>G
- Sequence
cacgcgagcacgggtgcgcagacg[C/G]acgcacacacacacacggtgaaac
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | 0.21 | 0.86 | 2.60 | |||
| MCF7 (Invasive ductal breast carcinoma) | 0.90 | -0.08 | 1.70 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adrenal_Gland, Artery_Tibial, Cells_Cultured_fibroblasts, Heart_Left_Ventricle, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg