rs35611779 chr2:12177158 C>A
- Sequence
ctgggtgaccctgtgctaatgagt[C/A]tccactggtgagtcatctcccggc
- ASB in cell types
- HL-60 (acute myeloid leukemia) coronary artery smooth muscle
- ASB for transcription factors
- SKI_HUMAN JUN_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SKI_HUMAN | 2.26 | n/a | 2.00 | n/a | n/a | |||
| JUN_HUMAN | 1.44 | -1.07 | 1.33 | -3.20 | Concordant |
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Motif analysis
