rs35719 chr12:100573882 C>A
- Sequence
agcctgagggctccaggagccccc[C/A]gctctctgaggccccgaagctgag
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) keratinocytes
- ASB for transcription factors
- SNAI2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SNAI2_HUMAN | 2.93 | n/a | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Frontal_Cortex_BA9, Cells_Cultured_fibroblasts, Heart_Atrial_Appendage, Liver, Nerve_Tibial, Pancreas, Testis, Thyroid