rs357438 chr7:138338543 G>C
- Sequence
tgaggaaagctgttatcctaaaat[G/C]tctgtataacaatagagtgcaggg
- ASB in cell types
- K562 (myelogenous leukemia) VCaP (prostate carcinoma)
- ASB for transcription factors
- NFIC_HUMAN ARI1B_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIC_HUMAN | 0.37 | 2.14 | 1.39 | n/a | No Hit | |||
| ARI1B_HUMAN | -3.00 | 2.15 | 1.50 | n/a | n/a | |||
| FOXA1_HUMAN | -0.11 | 0.94 | 1.50 | n/a | No Hit |
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