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rs358304 chr4:140373602 C>G

Sequence
cggctgggacgggatgggattctt[C/G]tcacggcgcacgttctgtgggcgg
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
KDM1A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KDM1A_HUMAN 1.89 -1.09 0.021.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Tibial Breast_Mammary_Tissue Cells_Cultured_fibroblasts Cells_EBV-transformed_lymphocytes Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Lung Muscle_Skeletal Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Thyroid Whole_Blood

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