rs35863302 chr19:11560489 C>T
- Sequence
gagagagaggggttagctgtgtca[C/T]gtgtccctgagttgaagaagatga
- ASB in cell types
- HEK293 (embryonic kidney) GM12878 (female B-cells) CD34+ hematopoietic stem cells-derived proerythroblasts H929 (plasma cell myeloma)
- ASB for transcription factors
- TAL1_HUMAN FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TAL1_HUMAN | -0.63 | 1.50 | 1.56 | n/a | No Hit | |||
| FOXK2_HUMAN | -1.81 | 1.69 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Caudate_basal_ganglia, Esophagus_Muscularis, Whole_Blood