rs35886181 chr1:2460052 G>A
- Sequence
ctcttctgctccggcagtgactgt[G/A]ctccagctggcgctgtccagccct
- ASB in cell types
- liver LNCaP (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.16 | 1.07 | 1.15 | 0.55 | Weak Concordant | |||
| RAD21_HUMAN | -1.76 | 2.04 | 1.33 | n/a | n/a |
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Motif analysis
