rs35891640 chr13:20476035 C>T
- Sequence
cagttccggggcaggtcctgcgca[C/T]gcggcaggaaggaaggaaaccaca
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- COT1_HUMAN IKZF1_HUMAN IKZF2_HUMAN BHE40_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COT1_HUMAN | -1.97 | 1.89 | 1.33 | n/a | No Hit | |||
| IKZF1_HUMAN | 0.61 | 0.82 | 1.22 | n/a | No Hit | |||
| IKZF2_HUMAN | -0.95 | 1.18 | 1.33 | n/a | n/a | |||
| BHE40_HUMAN | 1.23 | -1.50 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Putamen_basal_ganglia, Esophagus_Mucosa, Heart_Atrial_Appendage, Minor_Salivary_Gland, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood