ADASTRA v1.6.10
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rs359443
chr5:173856262
G
>
A
Sequence
agaactctttacctccctgtttta[G/A]gattcaggctccttgtttccctag
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
NR2C1_HUMAN
KDM1A_HUMAN
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NR2C1_HUMAN
-1.14
1.90
1.00
9.1·10
-3
2.00
n/a
No Hit
KDM1A_HUMAN
-1.03
1.88
1.00
0.04
2.00
n/a
n/a
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5
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Motif analysis
No data available
Genetic associations
EMBL-EBI
risk-taking tendency (4-domain principal component model)
GRASP
college completion
,
diastolic blood pressure (dbp)
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)