ADASTRA v1.6.10
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rs359477
chr5:173878429
T
>
C
Sequence
ttatctccatgtccccagggccta[T/C]cactgagcctgtcatgtggtagac
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
KDM1A_HUMAN
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KDM1A_HUMAN
1.80
-0.72
0.05
1.00
2.00
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
arthritis including non-rheumatoid
,
crohns disease
,
diastolic blood pressure (dbp)
,
irritible bowel syndrome
,
maternal transmission distortion
,
premature ovarian failure
,
systolic blood pressure (sbp)
,
total cholesterol
,
waist hip ratio
GTEx eQTL
Heart_Left_Ventricle
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)