rs36116812 chr5:141897607 T>C
- Sequence
actgagagatggttcaatgggtta[T/C]gcaataatcttccaactcagtttt
- ASB in cell types
- mesenchymal stem cells
- ASB for transcription factors
- CEBPB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | -1.00 | 1.86 | 1.72 | -2.22 | Discordant |
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Motif analysis
Genetic associations
GTEx eQTL Artery_Aorta, Colon_Sigmoid, Colon_Transverse, Esophagus_Muscularis, Testis, Thyroid, Whole_Blood