rs36155 chr5:66864342 T>A
- Sequence
gtgaagggaatcccagagatcctg[T/A]gttgagaacattctgggagaggtt
- ASB in cell types
- LNCaP C4-2B (prostate carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.52 | -0.21 | 1.89 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP bipolar disorder, childhood acute lymphoblastic leukemia, major depressive disorder, obesity with early age of onset (age >2)