rs362245 chr22:22519994 G>A
- Sequence
gtagttgaagcagagaattgcaat[G/A]cctaaaatatttgccatctagtct
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CLOCK_HUMAN KDM1A_HUMAN NR2C1_HUMAN NCOR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CLOCK_HUMAN | 2.37 | n/a | 2.00 | n/a | No Hit | |||
| KDM1A_HUMAN | 3.99 | n/a | 6.00 | n/a | n/a | |||
| NR2C1_HUMAN | 2.32 | n/a | 5.50 | n/a | No Hit | |||
| NCOR1_HUMAN | 2.03 | n/a | 6.00 | n/a | n/a | |||
| EP400_HUMAN | 4.15 | n/a | 6.00 | n/a | n/a |
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