rs364677 chr1:2140326 A>G
- Sequence
accatcagaataggtaagggtgtg[A/G]caggtctaaaacatgaaaatgggc
- ASB in cell types
- HEK293 (embryonic kidney) SK-N-SH (neuroblastoma)
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| HEK293 (embryonic kidney) | 0.50 | -0.28 | 1.94 | |||
| SK-N-SH (neuroblastoma) | 1.71 | -1.34 | 1.33 |
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Motif analysis
No data available
Genetic associations
GRASP chronic kidney disease, height, ldl cholesterol, microalbuminuria, serum creatinine, waist hip ratio
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Breast_Mammary_Tissue, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood