rs365819 chr20:46406389 G>A
- Sequence
cgccacccctcgggggcctgacga[G/A]ccggcgcggtccagcccaggcccg
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) HEK293T (embryonic kidney)
- ASB for transcription factors
- REST_HUMAN PRD10_HUMAN EGR2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| REST_HUMAN | -0.39 | 3.16 | 2.00 | n/a | No Hit | |||
| PRD10_HUMAN | -1.52 | 1.96 | 2.00 | n/a | n/a | |||
| EGR2_HUMAN | -1.75 | 2.11 | 2.00 | n/a | No Hit |
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