rs367948 chr8:26577600 G>C
- Sequence
cccgaagccccgccgtctcggggt[G/C]ccgcccctccccccggccgcgacg
- ASB in cell types
- foreskin keratinocyte K562 (myelogenous leukemia) GM12878 (female B-cells) breast tumor tissue
- ASB for transcription factors
- CTCF_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.16 | 3.21 | 1.81 | 0.95 | Weak Concordant | |||
| ESR1_HUMAN | -1.93 | 2.00 | 2.00 | n/a | No Hit |
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Motif analysis
