ADASTRA v1.6.10
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rs368019
chr11:5548298
C
>
T
Sequence
ctcagtggagcatatacacaagta[C/T]tggagatcaggacctcagtttata
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
IKZF1_HUMAN
MTA2_HUMAN
IKZF2_HUMAN
Search SNPs nearby
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View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN
-0.96
1.64
1.00
4.9·10
-3
1.33
n/a
No Hit
MTA2_HUMAN
-1.97
2.02
1.00
0.01
1.33
n/a
n/a
IKZF2_HUMAN
-1.01
1.38
1.00
0.04
1.33
n/a
n/a
Items per page:
5
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Motif analysis
No data available
Genetic associations
GRASP
diastolic blood pressure (dbp)
,
salmonella-induced pyroptosis
,
serum creatinine
,
systolic blood pressure (sbp)
,
urinary albumin-to-creatinine ratio
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Aorta
,
Esophagus_Muscularis
,
Kidney_Cortex
,
Ovary
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)