rs368456222 chr10:42146280 A>G
- Sequence
ttcacctcatcatttcatttcagc[A/G]tttcatttcatttcttcatttcat
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma)
- ASB for transcription factors
- ATF7_HUMAN ATF3_HUMAN TIF1A_HUMAN ATF4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF7_HUMAN | 2.24 | -2.49 | 1.33 | n/a | n/a | |||
| ATF3_HUMAN | 2.54 | -3.07 | 1.33 | n/a | No Hit | |||
| TIF1A_HUMAN | 2.28 | -1.36 | 1.42 | n/a | n/a | |||
| ATF4_HUMAN | 2.64 | n/a | 2.00 | -3.69 | Concordant | |||
| CEBPB_HUMAN | 2.23 | -2.93 | 2.00 | n/a | No Hit |
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Motif analysis
