ADASTRA v1.6.10
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rs37024
chr16:56932159
T
>
G
Sequence
ggcgcgcgccccagagacgtgaac[T/G]gtcgttgcagagattgcgggcggc
ASB in cell types
HEK293 (embryonic kidney)
A549 (lung carcinoma)
GM12878 (female B-cells)
spleen
Show more
(+6 others)
ASB for transcription factors
CTCF_HUMAN
JUN_HUMAN
BCL3_HUMAN
FOXK2_HUMAN
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View in PheLiGe
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
0.15
1.44
1.00
5.0·10
-14
1.44
n/a
No Hit
JUN_HUMAN
-0.37
1.60
1.00
5.0·10
-7
1.87
n/a
No Hit
BCL3_HUMAN
-0.66
1.48
0.90
0.03
2.00
n/a
n/a
FOXK2_HUMAN
1.50
-2.10
0.03
1.00
1.75
n/a
n/a
Items per page:
5
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Heart_Atrial_Appendage
,
Heart_Left_Ventricle
,
Lung
,
Pancreas
,
Skin_Sun_Exposed_Lower_leg
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)