rs372333542 chr15:34515329 C>G
- Sequence
ctctctctctctctctctctctct[C/G]tctgtgtgtgtgtgtgtgtgtgtg
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells)
- ASB for transcription factors
- NFIC_HUMAN MEF2B_HUMAN MGAP_HUMAN GMEB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIC_HUMAN | 3.47 | n/a | 2.00 | n/a | No Hit | |||
| MEF2B_HUMAN | 2.79 | n/a | 1.33 | n/a | No Hit | |||
| MGAP_HUMAN | 2.57 | n/a | 2.00 | n/a | n/a | |||
| GMEB1_HUMAN | 2.68 | n/a | 2.00 | n/a | n/a | |||
| NCOR1_HUMAN | 2.31 | -3.35 | 2.00 | n/a | n/a |
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