rs3731847 chr2:38377209 A>G
- Sequence
ggtcgctggtccgtcgccggcgcc[A/G]cagcccctggtgcggttgctgccc
- ASB in cell types
- tibial nerve fetal bone marrow-derived mononuclear cells HEK293T (embryonic kidney) thymus-derived CD34- cells
- ASB for transcription factors
- KMT2A_HUMAN BC11B_HUMAN CTCF_HUMAN ZFX_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KMT2A_HUMAN | 0.69 | 2.15 | 1.29 | n/a | n/a | |||
| BC11B_HUMAN | 1.69 | -0.27 | 1.92 | n/a | n/a | |||
| CTCF_HUMAN | 1.43 | 0.75 | 1.39 | 2.01 | Concordant | |||
| ZFX_HUMAN | -0.32 | 1.52 | 1.50 | n/a | No Hit | |||
| BCL3_HUMAN | 0.11 | 1.04 | 1.31 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adrenal_Gland, Artery_Tibial, Brain_Hippocampus, Esophagus_Mucosa, Heart_Left_Ventricle, Nerve_Tibial, Pancreas, Pituitary, Testis