rs3738019 chr1:203340346 C>A
- Sequence
tggtggaaagggttgaaaaaaaaa[C/A]cccagttattctatatctcttggg
- ASB in cell types
- A549 (lung carcinoma) erythroid cells HEK293 (embryonic kidney) ovary
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN SMC3_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.86 | 0.37 | 1.34 | n/a | No Hit | |||
| RAD21_HUMAN | 1.31 | -0.11 | 1.88 | n/a | n/a | |||
| SMC3_HUMAN | 1.03 | -0.45 | 2.03 | n/a | n/a | |||
| ESR1_HUMAN | 1.86 | -3.78 | 2.50 | n/a | No Hit |
Items per page:
1 – 4 of 4