rs3738067 chr1:28736724 G>A
- Sequence
tgggggcggggaggccgtgagcac[G/A]gcttccgctcctccaatccgccag
- ASB in cell types
- HEK293 (embryonic kidney) erythroid progenitors HepG2 (hepatoblastoma) OVCAR8 (high grade ovarian serous adenocarcinoma)
- ASB for transcription factors
- NFRKB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFRKB_HUMAN | -3.03 | 2.32 | 1.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP body mass index (bmi), diastolic blood pressure (dbp), obesity with early age of onset (age >2), systolic blood pressure (sbp), urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Caudate_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Nerve_Tibial, Small_Intestine_Terminal_Ileum, Spleen, Thyroid, Whole_Blood