rs3738262 chr1:201114215 A>G
- Sequence
taggttcggtctgggctgagcgcc[A/G]gcagcaatctggcctcccatccct
- ASB in cell types
- HEK293 (embryonic kidney) MCF7 (Invasive ductal breast carcinoma) A549 (lung carcinoma)
- ASB for transcription factors
- ZN398_HUMAN SMC3_HUMAN RAD21_HUMAN ZN366_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN398_HUMAN | 3.78 | n/a | 2.00 | n/a | n/a | |||
| SMC3_HUMAN | -0.11 | 1.27 | 2.03 | n/a | n/a | |||
| RAD21_HUMAN | 0.76 | 1.20 | 1.86 | n/a | n/a | |||
| ZN366_HUMAN | 2.58 | n/a | 2.00 | n/a | n/a | |||
| Z585B_HUMAN | 2.10 | -1.93 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adrenal_Gland, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Minor_Salivary_Gland, Muscle_Skeletal, Nerve_Tibial, Ovary, Pancreas, Pituitary, Prostate, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Stomach, Thyroid, Uterus, Vagina, Whole_Blood