rs3740514 chr10:97319197 C>T
- Sequence
ccgtcccccagcggcacagcaccc[C/T]ctccccggcgcggtggtagggccc
- ASB in cell types
- fetal bone marrow-derived mononuclear cells
- ASB for transcription factors
- ARNT_HUMAN CLOCK_HUMAN IKZF2_HUMAN KMT2A_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ARNT_HUMAN | 1.89 | -1.75 | 1.00 | n/a | No Hit | |||
| CLOCK_HUMAN | 2.28 | -3.43 | 2.00 | n/a | No Hit | |||
| IKZF2_HUMAN | -0.41 | 1.34 | 1.33 | n/a | n/a | |||
| KMT2A_HUMAN | 1.79 | -1.30 | 1.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Ovary, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Thyroid, Whole_Blood