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rs37415 chr7:15744049 G>A

Sequence
tcactacctaactgtcacctgtca[G/A]tgtaaacattttaaaattaacaga
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 1.16 -0.16 2.6·10-41.00 1.45 1.26 Weak Discordant
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Motif analysis

FOXA1_HUMAN Weak Discordant
FOXA1_HUMAN pic

Genetic associations

GRASP adiponectin levels hdl cholesterol total cholesterol years of education

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