rs3743566 chr16:58511881 C>T
- Sequence
agggagattcgctacggatccagg[C/T]cattcctgggtgagcccttgggca
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | 0.72 | -0.26 | 2.12 | |||
| HepG2 (hepatoblastoma) | -0.36 | 0.93 | 2.00 |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, age-related hearing impairment, aortic valve calcium, barnes akathisia rating scale, birth weight, obesity with early age of onset (age >2), simpson-angus scale
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Muscle_Skeletal, Nerve_Tibial, Pituitary, Testis, Thyroid