rs3746626 chr20:56458657 G>A
- Sequence
ggccactaagaatgccgtgctcac[G/A]taccccagccctgccgcgctgggg
- ASB in cell types
- T47D (invasive ductal carcinoma)
- ASB for transcription factors
- HIF1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HIF1A_HUMAN | 1.55 | -1.86 | 1.50 | -5.80 | Concordant |
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Motif analysis
