rs3749895 chr6:116279611 C>G
- Sequence
ggggagtaccgccacggcccgcgg[C/G]atcctggggtacgcccccctcctc
- ASB in cell types
- HepG2 (hepatoblastoma)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| HepG2 (hepatoblastoma) | 0.93 | -0.37 | 2.00 |
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Motif analysis
No data available
Genetic associations
GRASP aortic valve calcium, hdl cholesterol change with statins, lung function, forced expiratory volume in 1 second (fev1), total cholesterol, triglycerides
GTEx eQTL Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Testis