Attention! You are using release Soos. You can switch to the latest ADASTRA version: adastra.autosome.org

rs3749982 chr6:32894830 T>A

Sequence
cgggcggcagtatgcctgaggggg[T/A]cctccgtgttcgcgcctcccgccg
ASB in cell types
cranial neural crest cells CD14+ monocytes
ASB for transcription factors
AP2A_HUMAN STAT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
AP2A_HUMAN 2.92 n/a 6.3·10-51.00 2.00 -0.65 Weak Concordant
STAT1_HUMAN 1.90 -3.82 0.021.00 2.50 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

AP2A_HUMAN Weak Concordant
AP2A_HUMAN pic

Genetic associations

EMBL-EBI disc degeneration (lumbar)
GRASP lumbar disc degeneration rheumatoid arthritis
GTEx eQTL Artery_Tibial Esophagus_Gastroesophageal_Junction Esophagus_Muscularis Nerve_Tibial Whole_Blood

Download