rs3760959 chr19:3176276 A>G
- Sequence
gacgcagtttgtcagtttgccaac[A/G]gcctgctttcatgagaacagtttg
- ASB in cell types
- HEK293 (embryonic kidney) GM12878 (female B-cells) LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXK2_HUMAN FOXA1_HUMAN SCRT2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | -2.45 | 2.22 | 1.33 | n/a | n/a | |||
| FOXA1_HUMAN | 1.22 | -0.65 | 1.37 | n/a | No Hit | |||
| SCRT2_HUMAN | -3.14 | 2.38 | 2.00 | n/a | n/a |
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