rs376212331 chr12:31120032 A>G
- Sequence
ctggctcttaggcccccatcgcag[A/G]gtggggaggcaccacatgcgaggc
- ASB in cell types
- HEK293 (embryonic kidney) HEK293T (embryonic kidney)
- ASB for transcription factors
- PATZ1_HUMAN ZBT10_HUMAN PRDM9_HUMAN GLIS2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PATZ1_HUMAN | 3.27 | n/a | 2.00 | 0.95 | Weak Discordant | |||
| ZBT10_HUMAN | 2.93 | n/a | 2.00 | n/a | n/a | |||
| PRDM9_HUMAN | 2.25 | -1.62 | 2.00 | n/a | n/a | |||
| GLIS2_HUMAN | 2.48 | n/a | 6.00 | n/a | n/a |
Items per page:
1 – 4 of 4
Motif analysis
