rs3768403 chr1:226711291 A>G
- Sequence
cctccttcctactccacctcccca[A/G]aatcctttgactccagttcgatat
- ASB in cell types
- HEK293 (embryonic kidney) HEK293T (embryonic kidney) GM12878 (female B-cells)
- ASB for transcription factors
- ESR1_HUMAN FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 1.97 | n/a | 2.50 | n/a | No Hit | |||
| FOXK2_HUMAN | 1.76 | 1.11 | 1.56 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), diabetic retinopathy in type 2 diabetes mellitus