rs3771627 chr2:158586754 C>T
- Sequence
tttatctagagcagtttgctcaac[C/T]acagttcttccagaaggcattttt
- ASB in cell types
- A549 (lung carcinoma) LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN CEBPB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.22 | 1.13 | 1.88 | n/a | No Hit | |||
| CEBPB_HUMAN | -0.04 | 0.79 | 1.66 | n/a | No Hit |
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