rs3771712 chr2:159396057 A>G
- Sequence
acaacaatcaaaagcaaaaaggta[A/G]agcaatgaacatggagacagtgta
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.47 | -0.12 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP chronic kidney disease, cystatin c in serum, fasting insulin, hdl cholesterol, homa-b, homa-ir, severe diabetic retinopathy, triglycerides
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Stomach, Testis, Thyroid