rs3773447 chr3:15478512 G>T
- Sequence
cttgataacatgtgtttggttcac[G/T]cagagtcaccgtgaccttaagtaa
- ASB in cell types
- ZR-75-1 (invasive ductal carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| ZR-75-1 (invasive ductal carcinoma) | -1.51 | 1.85 | 2.00 |
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Motif analysis
No data available
Genetic associations
GRASP bipolar disorder, chronic kidney disease, hdl cholesterol, obesity with early age of onset (age >2), serum creatinine, uric acid
GTEx eQTL Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Ovary, Pituitary, Prostate, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Thyroid, Whole_Blood