rs377722 chr1:16621256 G>C
- Sequence
aaggccatggggactgcagggtga[G/C]tggcatgccctggagccatgtagt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) erythroid cells VCaP (prostate carcinoma) 786-O (renal carcinoma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN AP2C_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.07 | -0.44 | 1.70 | n/a | No Hit | |||
| RAD21_HUMAN | 2.28 | -2.23 | 1.67 | n/a | n/a | |||
| AP2C_HUMAN | 2.07 | -2.59 | 2.00 | n/a | No Hit |
Items per page:
1 – 3 of 3