rs3792589 chr3:183885037 A>G
- Sequence
ttctgtcccaccgcttcccctccc[A/G]ctgctcagctggctccgggagcga
- ASB in cell types
- foreskin keratinocyte MCF7 (Invasive ductal breast carcinoma) CD14+ monocytes periferal blood macrophages
- ASB for transcription factors
- CTCF_HUMAN STAT1_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.78 | 0.43 | 1.40 | n/a | No Hit | |||
| STAT1_HUMAN | 2.28 | -3.17 | 2.50 | n/a | No Hit | |||
| SPI1_HUMAN | 1.67 | -0.25 | 1.83 | 0.49 | Weak Discordant |
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Motif analysis
