rs379402 chr5:141513923 C>G
- Sequence
aagaacacaaagacagagccactg[C/G]ggttatctggctggtcagcaaggg
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- RUNX3_HUMAN IKZF2_HUMAN BHE40_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RUNX3_HUMAN | 2.49 | -2.54 | 1.33 | -2.82 | Concordant | |||
| IKZF2_HUMAN | 1.22 | -0.89 | 1.33 | n/a | n/a | |||
| BHE40_HUMAN | 1.75 | -1.48 | 1.33 | n/a | No Hit |
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Motif analysis
