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rs3798251 chr6:130933966 G>A

Sequence
gctgaggagacgatgatgggaagc[G/A]cacaatgcaatctatacattacag
ASB in cell types
HepG2 (hepatoblastoma) breast tumor tissue
ASB for transcription factors
FOXA1_HUMAN SOX13_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 1.18 -0.07 6.8·10-31.00 2.14 n/a No Hit
SOX13_HUMAN 1.86 n/a 7.1·10-31.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP diabetic retinopathy in type 2 diabetes mellitus ldl cholesterol
GTEx eQTL Brain_Spinal_cord_cervical_c-1 Esophagus_Mucosa Liver

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