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rs3800869 chr7:2070298 C>T

Sequence
gaaccccaggactccacctcctca[C/T]gggaggggctcccaggaagggcac
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
NRF1_HUMAN IKZF1_HUMAN EP400_HUMAN GMEB1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NRF1_HUMAN n/a 2.57 1.001.0·10-4 2.00 n/a No Hit
IKZF1_HUMAN n/a 2.79 1.001.5·10-4 2.00 n/a No Hit
EP400_HUMAN n/a 2.51 1.003.4·10-3 2.00 n/a n/a
GMEB1_HUMAN n/a 2.11 1.000.05 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Heart_Atrial_Appendage Muscle_Skeletal Whole_Blood

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