rs3802259 chr8:133496607 T>C
- Sequence
ggagggggcgtgacttgcccaagg[T/C]tgtacactggctgaggtggcacta
- ASB in cell types
- foreskin keratinocyte GM12878 (female B-cells) T47D (invasive ductal carcinoma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN KDM5B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.17 | 0.49 | 1.47 | n/a | No Hit | |||
| RAD21_HUMAN | 0.93 | -0.06 | 1.28 | n/a | n/a | |||
| KDM5B_HUMAN | 1.85 | -1.65 | 1.33 | n/a | n/a |
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