rs3806599 chr2:241149506 A>C
- Sequence
ccaccgaccaatcgcacagcgact[A/C]gcaccgattgacaagctccacgga
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- RFX1_HUMAN PKNX1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RFX1_HUMAN | 0.67 | n/a | 2.25 | 0.75 | Weak Discordant | |||
| PKNX1_HUMAN | 0.50 | -0.01 | 1.67 | n/a | No Hit |
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Motif analysis
