rs380836 chr19:29872341 C>G
- Sequence
gcccctgctccccgcccgcgggtg[C/G]cttcgctgatgagcctgaggcggg
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.89 | 1.98 | 1.22 | 2.48 | Concordant |
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Motif analysis
