rs3809456 chr14:104687768 A>G
- Sequence
cccctcgcccacacctgacctcct[A/G]ctccagcctctgagtaaggctcag
- ASB in cell types
- SK-BR-3 (breast adenocarcinoma)
- ASB for transcription factors
- AP2C_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| AP2C_HUMAN | 1.35 | 2.16 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP age at death with kuru exposure, diastolic blood pressure (dbp), systolic blood pressure (sbp), variant creutzfeldt-jakob disease
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Nucleus_accumbens_basal_ganglia, Colon_Sigmoid, Esophagus_Mucosa, Esophagus_Muscularis, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid