ADASTRA v1.6.10
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rs3810382
chr19:39824804
G
>
C
Sequence
ctcttgattggccggttgggagac[G/C]tacatttccaaattaccgtggaaa
ASB in cell types
tibial artery
breast tumor tissue
gastroesophageal sphincter
ASB for transcription factors
CTCF_HUMAN
ESR1_HUMAN
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
-0.16
1.35
1.00
2.9·10
-7
1.33
n/a
No Hit
ESR1_HUMAN
1.62
-0.70
0.01
0.99
2.50
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration (geographic atrophy)
,
cystatin c in serum
,
hdl cholesterol
GTEx eQTL
Brain_Cerebellum
,
Lung
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)