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rs3810382 chr19:39824804 G>C

Sequence
ctcttgattggccggttgggagac[G/C]tacatttccaaattaccgtggaaa
ASB in cell types
tibial artery breast tumor tissue gastroesophageal sphincter
ASB for transcription factors
CTCF_HUMAN ESR1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN -0.16 1.35 1.002.9·10-7 1.33 n/a No Hit
ESR1_HUMAN 1.62 -0.70 0.010.99 2.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy) cystatin c in serum hdl cholesterol
GTEx eQTL Brain_Cerebellum Lung

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